BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007A05SP1|AL425621
(239 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1304 393 e-110
>3x_Contig1304
Length = 6732
Score = 393 bits (193), Expect = e-110
Identities = 223/239 (93%)
Strand = Plus / Plus
Query: 1 aaagtacttatattatcaatatcacttttctyttgccctatcccattctcatatatcttt 60
|||||| | ||||||||||||||| | |||| ||||||||||||||||||||||||||||
Sbjct: 5477 aaagtagtcatattatcaatatcagtgttctgttgccctatcccattctcatatatcttt 5536
Query: 61 bawataatkttgctcttacssccagttgtttcsttatagtcttttgccasttcsataaac 120
| ||||| |||||||||| ||||| ||||| |||||||||||||||| ||| |||||
Sbjct: 5537 gaaataatgttgctcttacggccagtggtttcgttatagtcttttgccagttcgataaag 5596
Query: 121 tttgchatcaatttcccaccaagctcagaacagcacgattctggatgatattgcactcca 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5597 tttgcaatcaatttcccaccaagctcagaacagcacgattctggatgatattgcactcca 5656
Query: 181 taccatggttttccactaatcctaccgcccataagaacttttttaccatcatctatagt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5657 taccatggttttccactaatcctaccgcccataagaacttttttaccatcatctatagt 5715
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.41 0.716 1.34
Gapped
Lambda K H
1.41 0.716 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1249
Number of Sequences: 1807
Number of extensions: 1249
Number of successful extensions: 97
Number of sequences better than 1.0e-20: 1
length of query: 239
length of database: 10,358,551
effective HSP length: 15
effective length of query: 224
effective length of database: 10,331,446
effective search space: 2314243904
effective search space used: 2314243904
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.5 bits)
S1: 12 (24.9 bits)
S2: 48 (98.3 bits)